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ERX3217841: Illumina HiSeq 2500 paired end sequencing
1 ILLUMINA (Illumina HiSeq 2500) run: 5.1M spots, 2.3G bases, 1.2Gb downloads

Submitted by: Centre de Biologie pour la Gestion des Populations (CBGP - UMR1062) (Centre de Biologie pour la Gestion des Populations)
Study: Genome sequencing of the endosymbiotic consortium and mitochondrion of Cinara (Cinara) cuneomaculata species voucher ACOE2628
show Abstracthide Abstract
Within the Lachninae subfamily of aphids, a putative ancient pseudogenisation of the riboflavin biosynthetic genes in the Lachninae's Buchnera last common ancestor rendered Buchnera unable to supply this essential nutrient to the aphid, and thus triggered the establishment of secondary co-obligate endosymbionts. Through co-occurrence data of same-haplotype secondary endosymbionts across different populations, we determined that Cinara cuneomaculata apparently harbours an Erwinia-related symbiont as Buchnera's co-obligate endosymbiont. Metabolic reconstruction of these endosymbionts, corroborates the co-obligate nature of these, particularly due to the putative riboflavin-provider role assumed by Erwinia-related symbiont
Sample: Cicuneomaculata_1
SAMEA5383210 • ERS3189582 • All experiments • All runs
Library:
Name: H25N7BCXY.IND18
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: NEBNext Ultra II DNA library prep kit and NEBNext Ultra II Q5 Master Mix
Runs: 1 run, 5.1M spots, 2.3G bases, 1.2Gb
Run# of Spots# of BasesSizePublished
ERR31900615,082,4622.3G1.2Gb2019-03-05

ID:
7383287

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